Limited information is available on the understanding and preferences of the young, old, pregnant, and immunocompromised consumers on food safety matters. As such the outcomes of this report will be used to inform NZFS risk management/risk communication activities i.e., the development and implementation of strategies/food safety messaging/campaigns used to engage with YOPI.
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Risk profile: Salmonella (non typhoidal) in and on eggs (2023)
The purpose of this project is to review and revise current methods and assumptions in AIM for birth and slaughter dates for individual classes of sheep and beef cattle grown for finishing. The current analysis suggests that a few birth and slaughter variables and assumptions in AIM will need additional consideration.
Development of a software tool to automate the generation of the uncertainty calculation table reported in the national inventory for the agriculture sector of the greenhouse gas inventory.
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Last updated
ISBN Online
978-1-991120-79-3
ISSN Online
2253-3923
Information on dairy farming systems: Determining Feed Eaten by New Zealand Dairy Cows 1990-2020 through Combining Data Sets
Within the dairy sector, several databases exist that have recorded farms, animals, and milk production over time, as well as feed use both through time and seasonally. This report assesses the feasibility of combining these databases to provide monthly estimates of feeds (grown on farm and imported) eaten by dairy cows from 1990 to 2020 for different types of farm systems and regions of New Zealand.
The purpose of this project was to evaluate the potential number of livestock carried on lifestyle blocks and blocks of land not included in the sampling frame of the Agricultural Production Survey (APS) and to evaluate the potential impacts on these stocks on agricultural greenhouse gas emissions.
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Last updated
ISBN Online
978-1-991120-77-9
ISSN Online
2253-3923
FAR 2024/09 Estimation of finfish release survival from New Zealand inshore commercial fisheries
This study estimated the post-release survival of inshore finfish with current commercial minimum legal sizes—blue cod, blue moki, butterfish, kingfish, red moki, red cod, sand flounder, snapper, tarakihi, trevally, and yellowbelly flounder—and those currently allowed to be returned under disposal code X— kingfish, rig, sand flounder, school shark, rough skate, smooth skate, and spiny dogfish.
A questionnaire was developed and circulated to fishers, fishery observers, and scientists with knowledge of each species to obtain their estimates of at-release survival (i.e., the probability the fish/shark was alive when put back into water) and post-release survival (the probability an individual was both alive at release and survived following release). Estimates were obtained for each gear type as well as fishing categories within each gear type, e.g., duration, depth, and bag size. For some species, estimates of post- release survival were informed by literature on the survival of same or similar species.
These data were used with fishery characterisations to model the survival for each species. For species with a minimum legal size, both at-release and post-release survival estimates were used, whereas for those species released under disposal code X, which may only be released if alive and likely to survive, only the post-release survival estimates were used.
The post-release survival from longlines for snapper, kingfish, and rough skate (assuming they are released alive) was “medium-high”, i.e., the lower bootstrapped 90% confidence range was lower than 0.50, but greater than 0.25, and upper 90% confidence range exceeded 0.75. The same survival range was estimated for snapper caught in pots. For snapper, this result was based on expert knowledge and incorporated literature-based mean values based on empirical studies for this species in New Zealand.
However, for rough skate, the result was based on the informed opinion of 2 science experts only (at-vessel survival was assumed to be 100%) and without the benefit of literature-based empirical estimates as none exist for this species. If at-release survival estimates are included for kingfish, the range decreases to “medium”. For blue cod, and other sharks, skates, and rays, survival from capture on bottom longline was “medium-low”. Red cod survival was “low”, and an “uncertain” outcome was applied to smooth skate and blue moki due to the lack of available knowledge. For species such as spiny dogfish and school shark, the lower range of perceived survival was at least partially a result of the wide range of depths where these species are discarded, which includes deepwater fisheries with larger vessels and potentially different handling practices.
Post-release survival of most species from trawl gear was perceived to be “medium-low” at best, with 90% confidence range either spanning 0.25 up to but less than 0.75, or else between 0.25 and 0.5. Blue cod, red cod, flatfish, and tarakihi were considered in the “low” range, where the 90% confidence range did not exceed 0.25. Survival of both rough and smooth skates in trawl gear was “uncertain”, based on the lack of empirical data for these species and the wide range of estimates for related species in overseas fisheries. Where bottom trawl with a Modular Harvest System cod-end was considered as a separate gear, the lack of available data on this gear type meant survival was considered “uncertain”. For set net, the perceived survival of all species where this gear was considered an important method, was “medium-low”.
The species-method survival confidence ranges presented in this report are based on the best currently available expert knowledge and thorough reviews of the current survival literature; as such, these ranges are unlikely to be improved upon without further investment in release survival research.
Published
Last updated
ISBN Online
978-1-991120-85-4
ISSN Online
1179-5352
Find out whether you need to measure your forest this mandatory emissions return period
FAR 2024/08 Commercial catch sampling for species proportion, sex, length, and age of jack mackerels in JMA 7 in the 2021–22 fishing year, with a summary of all available data sets
Jack mackerels (JMA) support significant commercial fisheries in New Zealand, with over 75% of the total jack mackerel catch taken by trawl fisheries off the west coasts of the North Island and South Island, in JMA 7. Three jack mackerel species are found in New Zealand waters, namely Trachurus declivis, T. murphyi, and T. novaezelandiae.
New Zealand commercial catches of jack mackerels have been recorded under the general code JMA. Therefore species-specific catch information is not available from the fishery data. Estimates of proportions of the three Trachurus species in the catch, based on observer data which includes separate codes for each species, are essential for assessment of the individual stocks.
This report updates the data collected by the New Zealand observer sampling programme from trawl landings of jack mackerels in JMA 7 with the data collected during the 2021–22 fishing year, including estimates of species proportions and sex ratios in the landings, catch-at-length (fork length, cm), and catch-at-age for these species.
Estimated proportions of catch by species based on observer data have historically shown that T. declivis comprises 61–73% of the catch for all statistical areas, followed by T. novaezelandiae at 21–33%, and T. murphyi at 2–8%. In 2021–22, proportions of T. declivis, T. novaezelandiae, and T. murphyi were 77%, 23%, and less than 1%, respectively.
Sampled sex ratios of T. declivis and T. novaezelandiae were close to a sex ratio of 1:1 in the 2021–22 fishing year, and sex ratios for T. murphyi were biased towards females (56%) in 2021–22.
Trachurus declivis and T. novaezelandiae fish in the observer data indicated decreasing proportions of larger and older fish in the commercial catch in recent years, whereas the length and age data for T. murphyi indicated the catch mainly comprised large, older fish, with little evidence of younger fish coming through.
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Last updated
ISBN Online
978-1-991120-83-0
ISSN Online
1179-5352
FAR 2024/07 Estimation of release survival of pelagic sharks and fish in New Zealand commercial fisheries
This project estimated survival of six pelagic species (southern bluefin tuna, Pacific bluefin tuna, swordfish, blue shark, mako shark, and porbeagle shark) following release from commercial fishing gear to inform a government review of their landing exceptions.
Fishery characterisations revealed that the main fishing gears responsible for discarded fish were surface longline (all species) and trawl (swordfish, mako, and porbeagle).
Literature reviews were conducted to document current knowledge on the status of an individual when brought to the vessel and ‘post-release’ survival (i.e., survival in the weeks to months following release) from these methods, as well as the factors that affect survival of each species. The key results were:
Bluefin tunas (including southern bluefin tuna and Pacific bluefin tuna) and swordfish typically have high post-release survival following capture by surface longline, with most studies reporting survival rates of 88% or greater for bluefin tunas and 50–88% for swordfish.
Blue shark have high at-vessel and post-release survival following capture by surface longline, with most studies reporting at-vessel and post-release survival rates of > 80%.
Mako have moderate to high at-vessel and post-release survival following capture by surface longline, with most studies reporting at-vessel and post-release survival rates ranging from about 50–87% and 56–94%, respectively.
Porbeagle have moderate to high at-vessel survival and variable post-release survival following capture by surface longline, with estimates of 56–79% and 25–90% for at-vessel and post-release survival, respectively.
There have been no comparable studies documenting at-vessel or post-release survival of swordfish, mako, or porbeagle from trawl.
A questionnaire was developed and circulated to fishers, fishery observers, and scientists with knowledge of each species to obtain their estimates of at-release survival (i.e., the probability the fish/shark was alive when put back into water), post-release survival, and combined survival (the probability an individual was both alive at release and survived following release) of the three shark species, and post-release survival of the thee fish species (in accordance with their current landing exceptions).
Questionnaire responses were used to derive survival probability range estimates for each species, with separate analyses conducted that included and excluded information from the literature.
For individuals released after capture by surface longline, the results of this analysis indicated post-release survival for southern bluefin tuna, Pacific bluefin tuna, and swordfish is likely to be high; blue shark are likely to have high at-release and post-release survival, and a medium-high combined survival; mako are likely to have medium at-release and medium-high post-release survival (reduced to medium if excluding information from the literature in the analysis), and low-medium combined survival; and porbeagle are likely to have low at-release survival, low-medium post-release survival, and low combined survival.
Post-release survival of swordfish released from trawl gear was likely to be low, and mako and porbeagle caught by trawl were likely to have low at-release, post-release, and combined survival.
These results, however, resulted from a small number of survey responses (only one respondent for trawl gear) and often without any comparable supporting published studies.
Survival estimates presented here should thus be interpreted with caution.
Published
Last updated
ISBN Online
978-1-991120-82-3
ISSN Online
1179-5352
FAR 2024/06 Inshore trawl survey off the west coast South Island and in Tasman Bay and Golden Bay, March–April 2023 (KAH2302)
This report presents the results from the 16th inshore trawl survey in a time series started in 1992 along the west coast of the South Island, from Farewell Spit to the Haast River mouth, and in Tasman Bay and Golden Bay.
The survey covers depths from 20 to 400 m (core strata) and surveys many species but is mainly focused on giant stargazer, red cod, red gurnard, spiny dogfish, and tarakihi. Since 2017, two additional strata have been surveyed in 10–20 m in Tasman Bay and Golden Bay to cover the full distribution of snapper in the geographic area.
Data collected include length, weight, and maturity data for selected species, and collection of otoliths (fish ear stones) of the key species for ageing. The trawl survey provides time series of relative biomass estimates and age, length, and maturity stage information used for stock assessments and fisheries management advice for key inshore species.
In 2023, 58 phase one stations were successfully completed in the core strata and another six were carried out in strata 20 and 21. Four phase two stations were completed to reduce the coefficient of variation for spiny dogfish and snapper.
Biomass estimates (in tonnes) for the target species in the core strata were: giant stargazer, 915 t; red gurnard, 1498 t; red cod, 69 t; snapper, 3633 t; spiny dogfish, 3043 t; and tarakihi, 493 t.
The snapper biomass (core strata plus the 10–20 m strata) was the highest ever in the time series and nearly triple that from the previous survey in 2021, with most fish 20 years or younger. Juvenile snapper were caught mostly in the 10–20 m strata. These strata provide important information on future recruitment and contain a variable proportion of the adult population.
A catchability analysis of the survey indicates that the survey can be considered representative of the time series.
Published
Last updated
ISBN Online
1179-5352
ISSN Online
978-1-991120-81-6
FAR 2024/05 Review of photo calibration methods for scampi (Metanephrops challengeri) photo surveys
Photo surveys are used to estimate abundance of scampi in New Zealand and provide important information for stock assessments.
Readers identify features in the survey photos as burrows or scampi. A statistical model is applied to produce an estimate of abundance for each survey. The statistical model takes into account differences between readers’ interpretation of features (what looks like a burrow to one reader may not to another) and differences in interpreting features over time (e.g., a reader may become more skilled at interpreting features over time, or technology could improve).
This report provides a review of the statistical model applied to produce an estimate of abundance from scampi photo surveys. The review found no concerns with the model or how it is being applied. Two readers re-read images from recent survey years to test if the adjustment over time has been appropriate. The results of the re-reads supported the model results.
Further work is suggested, including contracting a specialist statistician to provide greater theoretical understanding of the model and assumptions.