The trawl footprint describes how much seabed area has been contacted by trawling gear in New Zealand’s territorial sea (TS) and exclusive economic zone (EEZ), but it does not provide a measure of the effect of fishing on seabed communities.

This project used the trawl footprint information, in addition to other sources of information on impacts of contact by trawl gear on seabed fauna, to quantify the potential impacts to seabed communities and habitats.

Fishing gear types were first described and categorised, and footprints for each category of gear were produced. Two published impact assessment methods were applied to the TS and EEZ. The methods had different strengths and weaknesses and the outputs of the two methods were found to be complementary to one another.

The first method applied, the MRSP approach, combines information on gear categories, expert opinion on the vulnerability of seabed fauna to trawl gear, and the bottom contact footprint of trawl fishing. This approach does not consider how the fauna recover over time.

The second method, the relative benthic status (RBS) approach, uses information on the proportion of the seabed area swept by trawls and published information for depletion and recovery rates for seabed fauna considered to be particularly vulnerable to trawling. This method predicts a future state for the seabed fauna assuming no change to fishing effort.

This project provides outputs for both methods that can be used in conjunction with distribution data for seabed fauna to assess impacts of trawling and inform spatial planning processes.

Recognising the shortcomings of the MRSP and RBS approaches, two further approaches were explored and developed using data from the Chatham Rise. One approach aimed to enhance the RBS method by making this more relevant to local seabed fauna by using bycatch data from the Chatham Rise instead of relying on information from international sources. The results were encouraging but indicated that further method development is required.

The second approach expanded a previously applied spatio-temporal modelling approach to assess impacts to fauna thought to be useful indicators of potential trawling effects. It was found that this approach, as with the others, was limited by the available data, and further development is required to improve the utility of this approach in the future.

The Marine Ecology Research Group used detailed field surveys to assess the recovery of the inshore coastal ecosystem affected by the cataclysmic 2016 Kaikōura earthquake.

The earthquake caused seismic uplift from 0.5 to 6.4 m along 130 km of coastline and resulted in widespread die-offs of important flora and fauna and permanent losses to critical habitats.

There was much concern for the fate of diverse intertidal and subtidal communities, which include culturally and commercially important fisheries, such as pāua, and other habitat-forming species like bull kelp.

Shore-based and dive surveys tracked the abundance of over 120 marine species at 16 sites for more than six years. Findings depict major physical and ecological changes over time across sites.

The complex dynamics of recovery are described in detail in this report and clearly show that the effects from this disturbance to the Kaikōura coastal ecosystem are both significant and ongoing.

This long-term study is the first of its kind and provides a detailed data set and quantitative baselines that will help inform future coastal management decisions.

With funding from Fisheries New Zealand and support from the Department of Conservation (DOC), we trialled attaching short-term (24 hours) suction-cup recording tags (DTAGs) to Hector’s dolphins in Te Koko-o-Kupe/Cloudy Bay.

We wanted to determine if DTAGs are a possible tool for monitoring this endangered species and could help answer research gaps identified by DOC’s Threat Management Plan and Research Strategy.

We found these suction-cup DTAGs had little to no impact on Hector’s dolphin behaviour.

We tagged 11 dolphins, and their tags stayed attached for 1.5 to 24 hours.

We gathered over 83 hours of data on this species, including the first ever three-dimensional recordings of Hector’s dolphin underwater, their night-time movements, and recordings of the different sounds they make and hear during a typical day.

Overall, such insights about these dolphins can influence how we manage them in relation to their various threats.

Increasingly frequent and intense extreme weather events such as Cyclone Gabrielle are likely to impact seafloor marine ecosystems by accelerating soil erosion and sediment transport to the ocean by rivers.

The objective of this project was to understand sediment impacts from the February 2023 Cyclone Gabrielle event on marine environments of the Hawke’s Bay and Gisborne regions to enable rapid fisheries management decisions.

We conducted two vessel surveys in June and October 2023 focusing on offshore seabed environments deeper than 15 metres. As part of these surveys we mapped selected areas of the seafloor, surveyed life on the seabed using a towed underwater camera, and obtained sediment core samples.

An ocean current and sediment transport model was designed and implemented to investigate the transport and deposition of sediments after Cyclone Gabrielle. Concentrations of suspended sediments and other parameters in the surface ocean along the east coast of the North Island were estimated from satellite images. This satellite information was used to inform the sediment transport model and to characterise the spatial extent and longevity of the offshore sediment plumes generated by Cyclone Gabrielle. A Seafloor model was used to explore impacts and recovery of seafloor ecosystems following the cyclone.

The analysis of satellite images suggest that the influence of Cyclone Gabrielle lasted approximately two to three months across the Hawke’s Bay and Gisborne coastal marine areas, with surface ocean parameters largely returning to normal by May. The concentrations of suspended sediment at the ocean surface in February were significantly elevated, but they did not exceed values typical of winter months.
Seabed mapping revealed areas of significant sediment erosion, and deposition up to about one metre in thickness, at Pania Reef, Tangoio Reef and Clive outfall area in Hawke Bay. Elsewhere, sediment core observations suggested the presence of fresh muddy deposits of up to about 15 centimetres. Swell waves were resuspending muddy sediments at shallow locations for several months after the cyclone, as was evident by the low underwater visibility during camera deployments.

The abundance and diversity of the sediment fauna sampled in Hawke’s Bay and Gisborne before (2010) and after Cyclone Gabrielle (June and October 2023) tended to increase away from the shore and into deeper waters. Sediment fauna were less abundant in June 2023 when compared with 2010, but appeared to be recovering by October 2023.

Seafloor animal and plant communities are highly likely to have been impacted by sediments at 11 of the 36 locations we surveyed using the towed underwater camera, as assessed by observations including (1) fresh mud layer on the seafloor, (2) animal/plant life in poor condition, and/or (3) absence of seaweed at shallow depths. However, for most of these locations a direct link to Cyclone Gabrielle cannot be demonstrated because no information on the distribution of seafloor organisms is available from before the cyclone. The likely exception is Wairoa Hard in Hawke Bay, where available information shows that kelp and sponges were present before the cyclone but were almost completely or completely absent after the cyclone. Whether this loss of habitat has led to reductions in associated fish populations is unclear.

Although limited by the availability of data, the ocean current and sediment transport model produced realistic predictions of suspended sediment concentrations and deposition at the seafloor. In the days following the cyclone, sedimentation in Hawke Bay was predicted to occur mainly close to shore in the western and central parts of the bay. In the Gisborne region, there was deposition of up to about 10 centimetres of sediments offshore of Poverty Bay and along a narrow band of the coast to the north near Tokomaru and Tolaga bays. These model predictions are broadly consistent with observations from the sediment core samples.

The Seafloor model showed small declines in structure-forming organisms such as sponges for Hawke’s Bay following Cyclone Gabrielle. These declines were not substantial, most likely because the region is already impacted by decades of fishing and increased sedimentation. The Seafloor model predicted weaker cyclone impacts for Gisborne than Hawke’s Bay and indicated that continued trawling may slow down recovery of seafloor communities following extreme weather events.

The lack of pre-cyclone information was a major obstacle in assessing the potential impacts of the cyclone on seabed ecosystems. Information collected as part of this project now form a valuable baseline that will inform future impact assessments in the region. Another limitation is the inability to use towed cameras to survey inshore habitats for extended periods because of poor underwater visibility. A precautionary approach could be warranted in the period following an extreme weather event until key habitats and ecosystems can be surveyed, and fish stocks and catch levels should be carefully monitored in the years following the event.

Sediment transport modelling is a promising tool for rapidly identifying areas most at risk from sedimentation following extreme weather events. However targeted sampling of sediment and water parameters under normal and flood conditions would help improve the accuracy and reliability of model predictions. The Seafloor model could be used to explore how spatial changes in fishing effort could enhance recovery following extreme weather events and could be improved through better information on the distribution of seafloor sediment and reefs and their associated animal and plant communities, particularly in the Gisborne region.

The impact of extreme weather events is made worse by decades of increased sedimentation in New Zealand’s marine environments. Addressing the long-term issue of sedimentation in marine ecosystems and the impacts of extreme weather events will require addressing the factors that have made New Zealand’s catchments more prone to erosion.

New Zealand’s Hector’s dolphins are an endangered species. A key threat to their survival is entanglement in fishing gear, including trawl nets. In this study, we report on a field trial where underwater microphones (hydrophones) were fitted to trawling equipment and the echolocation clicks naturally produced by Hector’s dolphins were localised to determine how the dolphins interacted with the trawling equipment as it moved through the water. The hydrophones were protected within custom-built cages to withstand the physical stress associated with being attached to fishing equipment that is dragged along the seabed. The field trial was conducted off the coast of Timaru, New Zealand, in September and October 2022. While the hydrophones recorded dolphin sound underwater, a Fisheries New Zealand observer on the boat also looked out for dolphins.

The protective cages around the hydrophones proved effective and we were able to successfully localise dolphins. Dolphins were localised moving towards the mouth of the fishing net from various approach angles, and, on several occasions, we were able to successfully distinguish multiple dolphins each moving along different paths. Even though we only analysed a subset of the acoustic data from each trawl, dolphin clicks were detected acoustically during trawls on more occasions than the observer on the fishing boat was able to see dolphins. Unfortunately silt from the seabed entered some of the connections between the hydrophones and the acoustic recorder, which resulted in corrupted data on some days, but overall the field trial was successful.

This study showed that listening for the presence of dolphins can be more effective than looking for dolphins from a boat. We suggest that a combination of listening and looking for dolphins would be the most effective way to detect dolphins that might be near the fishing net. In the long term, the listening system described here could be developed into a real-time warning system that alerts the fishing vessel master when dolphins are close to the fishing net. If the vessel master is aware of the dolphins, they could avoid activities that result in high-risk of entanglement, such as sharp turns or drawing in the net at the end of the trawl. Dolphin detection could also help with targeted use of devices that encourage the dolphins to move away from the high-risk areas—such devices emit noise and should be used as little as possible to minimise noise pollution and disturbance to the dolphins.

Sea urchin barrens are sea urchin dominated areas of rocky reef that would normally support healthy kelp forest, but have little or no kelp due to overgrazing by sea urchins.

This review updates our understanding of sea urchin barrens in New Zealand and the role fishing plays in their establishment to date. It also identifies key work required to support management decisions, including collating data on the distribution of urchin barrens, reviewing information required to set catch limits for sea urchin predators, and developing regional management approaches.

We review published scientific literature on sea urchin barrens in New Zealand and the role of fishing in their development.

We also summarise results of a national workshop to support management of sea urchin barrens.

Research based on observations from marine protected areas suggests fishing of sea urchin predators is causing and/or maintaining sea urchin barrens in north-east New Zealand.

The extent of sea urchin barrens and contributing factors in other parts of New Zealand appear to vary, but there are few published studies on this.

Workshop discussions indicated an urgent need to develop a suite of management options to address sea urchin barrens at regional scales in collaboration with tangata whenua and stakeholders.

Changes in blue cod populations off Canterbury and in the Marlborough Sounds has raised concerns about the impact of human stressors on these populations, but the relationship between most stressors and blue cod is unknown.

Information on blue cod abundance was matched with environmental data to understand the habitat characteristics important for blue cod adults and juveniles off three Canterbury sites; Banks Peninsula, Motunau, Kaikōura.

Changes in potential stressors to blue cod habitat were compared with blue cod population status over 20 years at the sites off Canterbury and in the Marlborough Sounds.

Blue cod were associated with areas where the seafloor is rough and complex (e.g., reef systems), where structural habitat was provided by plants and animals, and in areas with higher water clarity and lower temperature.

Blue cod population status was related to stressors from land use (e.g., coastal water quality), and increasing water temperatures in most locations, although the intensity of these stressors has varied substantially over time and among locations.

This information provides guidance on the scale and focus for future research and potential management opportunities to limit these stressors and ensure sustainability of the blue cod fishery.

The study investigates cryptic mortality (i.e., deaths that are not observed) of seabirds in New Zealand’s trawl fisheries, separately for net captures and warp cable strikes. For net capture-related mortality, the results suggest that, on average, mortality was 2.5 times higher than when only based on observed captures. For warp strikes, estimates varied based on data sources, highlighting the need for tailored data collection due to uncertainties and sparseness in the current dataset.

The Spatially Explicit Fisheries Risk Assessment framework has recently been updated and applied to assess the fisheries risk to seabird populations within the New Zealand EEZ. In the current report, the approach is applied to seabirds globally in the southern hemisphere. Catchabilities were estimated from New Zealand captures. Then global fishing effort and species distributions were collated and used to assess the risk to seabirds from predicted fisheries captures throughout their range.

The total species population size estimate of New Zealand sea lion/pakake/whakahao was updated using the available demographic and population size information up to 2022 (the 2021–22 breeding season). All analyses were conducted within a Bayesian estimation framework, and the posterior total population size estimate was approximately 10 000 individuals in 2022 (median: 10 151; 95% credible interval: 8702–12 082 individuals), slightly below the estimate for 2015 using the same method.

A novel spatial risk assessment framework is proposed, based on the Spatially Explicit Fisheries Risk Assessment (SEFRA) and the Sustainability Assessment for Fishing Effects (SAFE). Risk is the probability that exploitation exceeds the Impact Sustainability Threshold (IST). Exploitation is estimated from the catchability and effort, using prior information on either the catchability or the population size. It is applied to shark and turtle species with different data characteristics.

The impact of video monitoring on estimating black petrel bycatch in bottom longline fisheries was assessed. Combining observer and video monitoring data resulted in lower estimated captures compared with using observer data alone. Simulations of different proportions of assessed video footage suggest currently overpredicted estimates of black petrel captures. Also, the analysis suggests that the presence of observers and/or cameras increased fishers’ compliance to report black petrel captures.

While effects of organic enrichment on inshore, soft-sediment communities are well studied, little is known about how finfish farm-derived impacts will manifest in open ocean environments. This report identifies key species that may be affected by open ocean aquaculture and describes physiological indicators that may provide insight into organism health. This is the first of several project objectives that work toward developing environmental health measures for use in offshore environments.

This report presents the spatial analysis of bottom-contacting effort by commercial trawl vessels and shellfish dredge vessels within the New Zealand Territorial Sea and 200 n. mile Exclusive Economic Zone (EEZ+TS), in waters open to trawling down to 1600 m depths. Fishing years 1989–90 to 2020–21 are covered for deepwater trawl and shellfish dredge fisheries and 2007–08 to 2020–21 for inshore, and 1989–90 to 2020–21 for inshore and deepwater trawling combined.

Commercial catch and effort data and fisheries observer records of catch and discards by species were used to estimate the rate and level of non-target catch and discards in the scampi and arrow squid trawl fisheries for fishing years 2002–03 to 2020–21. Estimates were made for broad categories of catch and discards including target species, QMS species, non-QMS fish, and non-QMS invertebrate species, and estimates of annual catch were made for several of the major individual non-target species.

This report details an implementation of the Spatially Explicit Fisheries Risk Assessment (SEFRA) framework to seabirds in the New Zealand Exclusive Economic Zone, attempting to quantify the impact of New Zealand commercial fisheries on New Zealand populations of seventy-one seabird species. As part of the project both the biological and fishery input data have been updated, as well as the structure of the model itself.